STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEP28545.1Hypothetical protein. (102 aa)    
Predicted Functional Partners:
asnS
asparagine--tRNA ligase; KEGG: cpr:CPR_2509 1.6e-172 asnS; asparaginyl-tRNA synthetase K01893; Psort location: Cytoplasmic, score: 10.00.
       0.555
EEP28546.1
Putative proton-coupled thiamine transporter YuaJ; KEGG: noc:Noc_2970 0.0044 cytochrome c oxidase, subunit I K02274; Psort location: CytoplasmicMembrane, score: 9.99.
       0.524
asnA
Aspartate--ammonia ligase; KEGG: cno:NT01CX_1288 4.2e-117 asnA; aspartate--ammonia ligase K01914; Psort location: Cytoplasmic, score: 10.00.
       0.453
Your Current Organism:
Shuttleworthia satelles
NCBI taxonomy Id: 626523
Other names: S. satelles DSM 14600, Shuttleworthia satelles DSM 14600, Shuttleworthia satelles VPI D143K-13, Shuttleworthia satelles str. DSM 14600, Shuttleworthia satelles strain DSM 14600
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.