STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEP28581.1Ferritin-like protein; Iron-storage protein. (170 aa)    
Predicted Functional Partners:
EEP28703.1
KEGG: ctc:CTC02090 5.0e-114 recQ; ATP-dependent DNA helicase recQ K03654; Psort location: Cytoplasmic, score: 8.87.
 
  
   0.758
EEP28845.1
Putative superoxide reductase; KEGG: pca:Pcar_2347 1.5e-18 desulfoferrodoxin K05919.
  
  
 0.731
msrB
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 
 0.543
rpsP
Ribosomal protein S16; Psort location: Cytoplasmic, score: 8.87; Belongs to the bacterial ribosomal protein bS16 family.
   
    0.481
recJ
KEGG: cac:CAC2232 1.3e-138 recJ; SsDNA exonuclease, RecJ K07462; Psort location: Cytoplasmic, score: 8.87.
       0.470
EEP29095.1
Rubredoxin; KEGG: sat:SYN_02123 9.2e-19 ferric-chelate reductase / rubredoxin K00521; Psort location: Cytoplasmic, score: 9.65.
  
  
 0.451
pta
KEGG: lla:L107797 1.2e-82 pta; phosphate acetyltransferase K00625.
       0.425
Your Current Organism:
Shuttleworthia satelles
NCBI taxonomy Id: 626523
Other names: S. satelles DSM 14600, Shuttleworthia satelles DSM 14600, Shuttleworthia satelles VPI D143K-13, Shuttleworthia satelles str. DSM 14600, Shuttleworthia satelles strain DSM 14600
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