STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEP27792.1KEGG: bcz:BCZK3497 5.9e-09 adaA; transcriptional regulator, AraC family K00567; Psort location: Cytoplasmic, score: 8.87. (261 aa)    
Predicted Functional Partners:
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
     
 0.891
EEP29469.1
Transcriptional regulator, AraC family; KEGG: baa:BA_4344 3.3e-14 Ada_Zn_binding, metal binding domain of Ada K00567; Psort location: Cytoplasmic, score: 9.98.
  
   0.809
EEP28786.1
Transcriptional regulator, AraC family; KEGG: bce:BC3740 2.6e-11 ADA regulatory protein K00567; Psort location: Cytoplasmic, score: 8.87.
  
     0.769
EEP27433.1
HAMP domain protein; KEGG: ctc:CTC01848 8.4e-33 yesM; two-component sensor kinase YesM K07718; Psort location: Cytoplasmic, score: 8.87.
  
  
  0.656
EEP27442.1
HAMP domain protein; KEGG: bcl:ABC3586 1.2e-33 two-component sensor histidine kinase K07718; Psort location: Cytoplasmic, score: 8.87.
  
  
  0.634
EEP27516.1
Transcriptional regulator, AraC family; KEGG: bce:BC3740 7.5e-14 ADA regulatory protein K00567; Psort location: Cytoplasmic, score: 8.87.
  
     0.634
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.579
EEP27791.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.571
EEP27435.1
Response regulator receiver domain protein; KEGG: ava:Ava_2028 8.8e-14 two component transcriptional regulator, LuxR family; Psort location: Cytoplasmic, score: 9.98.
  
  
  0.569
EEP27788.1
F5/8 type C domain protein; KEGG: sde:Sde_0598 7.6e-05 alpha-L-arabinofuranosidase K01209; Psort location: Cytoplasmic, score: 8.87.
 
  
  0.510
Your Current Organism:
Shuttleworthia satelles
NCBI taxonomy Id: 626523
Other names: S. satelles DSM 14600, Shuttleworthia satelles DSM 14600, Shuttleworthia satelles VPI D143K-13, Shuttleworthia satelles str. DSM 14600, Shuttleworthia satelles strain DSM 14600
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