STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEP27483.1Transporter, major facilitator family protein; Psort location: CytoplasmicMembrane, score: 10.00. (397 aa)    
Predicted Functional Partners:
rhaU
L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose.
  
  
 0.626
EEP27582.1
Putative ATP synthase F1, epsilon subunit; KEGG: lpl:lp_2097 2.3e-148 pts16ABC; fructose PTS, EIIABC K02768:K02769:K02770; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.615
EEP27484.1
GntP family permease; KEGG: eci:UTI89_C3106 2.3e-52 ygbN; hypothetical permease YgbN K03299; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.517
EEP27983.1
Phospholipase D domain protein; KEGG: san:gbs1088 3.8e-107 similar to cardiolipin synthetase K06131; Psort location: CytoplasmicMembrane, score: 7.63.
   
 
  0.436
EEP27482.1
Oxidoreductase, aldo/keto reductase family protein; KEGG: sus:Acid_2860 9.9e-93 aldehyde reductase K00011; Psort location: Cytoplasmic, score: 8.87.
       0.418
EEP28579.1
Hypothetical protein; KEGG: bce:BC1788 4.7e-47 lysophospholipase L2 K01048; Psort location: Cytoplasmic, score: 8.87.
  
  
  0.406
Your Current Organism:
Shuttleworthia satelles
NCBI taxonomy Id: 626523
Other names: S. satelles DSM 14600, Shuttleworthia satelles DSM 14600, Shuttleworthia satelles VPI D143K-13, Shuttleworthia satelles str. DSM 14600, Shuttleworthia satelles strain DSM 14600
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.