STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENO16735.1Transposase, IS116/IS110/IS902 family protein; COG3547 Transposase and inactivated derivatives. (340 aa)    
Predicted Functional Partners:
ENO16762.1
Amino acid adenylation domain-containing protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins; overlaps another CDS with the same product name.
     
 0.624
ENO16736.1
Succinylglutamate desuccinylase/aspartoacylase family protein; COG3608 Predicted deacylase.
       0.503
rimK
alpha-L-glutamate ligase; COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); Belongs to the RimK family.
       0.503
ENO16738.1
COG4067 Uncharacterized protein conserved in archaea.
       0.503
ENO16739.1
Mechanosensitive ion channel protein MscS; COG0668 Small-conductance mechanosensitive channel.
       0.503
ENO16740.1
Hypothetical protein.
       0.463
rsmJ
Protein YhiQ; Specifically methylates the guanosine in position 1516 of 16S rRNA.
  
    0.449
rsmD
Ribosomal RNA small subunit methyltransferase D; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family.
  
    0.449
Your Current Organism:
Marinobacter nanhaiticus
NCBI taxonomy Id: 626887
Other names: M. nanhaiticus D15-8W, Marinobacter nanhaiticus D15-8W, Marinobacter sp. D15-8W
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.