STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENO12612.1Protein damX; COG3267 Type II secretory pathway, component ExeA (predicted ATPase). (571 aa)    
Predicted Functional Partners:
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
  
    0.865
ENO17061.1
Hypothetical protein.
 
     0.724
ENO17059.1
Hypothetical protein.
  
     0.716
nusA
Transcription elongation factor NusA; Participates in both transcription termination and antitermination.
  
    0.691
aroK-2
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
  
    0.687
gltB
COG0067 Glutamate synthase domain 1.
       0.662
ENO15734.1
NolW domain-containing protein.
 
     0.657
ENO13745.1
Hypothetical protein.
  
     0.641
xrt
Hypothetical protein.
 
     0.637
bamA
Outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
   0.613
Your Current Organism:
Marinobacter nanhaiticus
NCBI taxonomy Id: 626887
Other names: M. nanhaiticus D15-8W, Marinobacter nanhaiticus D15-8W, Marinobacter sp. D15-8W
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