STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENO13951.1AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. (176 aa)    
Predicted Functional Partners:
ENO13618.1
COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.747
ENO13091.1
Transcriptional activator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.733
ENO16172.1
COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain.
  
   0.693
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.610
gltB
COG0067 Glutamate synthase domain 1.
    
  0.606
ENO16447.1
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.582
ENO16025.1
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.559
ENO12783.1
Transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.558
ENO13950.1
Two component LuxR family transcriptional regulator; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
     0.547
ENO13949.1
Histidine kinase; COG3292 Predicted periplasmic ligand-binding sensor domain.
 
   
 0.546
Your Current Organism:
Marinobacter nanhaiticus
NCBI taxonomy Id: 626887
Other names: M. nanhaiticus D15-8W, Marinobacter nanhaiticus D15-8W, Marinobacter sp. D15-8W
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.