STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK67117.1AP endonuclease, family 2; KEGG: taz:TREAZ_2226 4.7e-35 xylose isomerase domain-containing protein; K01816 hydroxypyruvate isomerase; Psort location: Cytoplasmic, score: 9.97; Belongs to the hyi family. (252 aa)    
Predicted Functional Partners:
KXK64513.1
AP endonuclease, family 2; KEGG: scy:SCATT_p01040 7.0e-08 Hydroxypyruvate isomerase; K01816 hydroxypyruvate isomerase; Psort location: Cytoplasmic, score: 8.96.
    
  0.903
KXK67118.1
AP endonuclease, family 2; KEGG: cls:CXIVA_15980 1.3e-80 IolE; sugar phosphate isomerase/epimerase; K03335 inosose dehydratase.
       0.782
KXK67119.1
AP endonuclease, family 2; KEGG: cls:CXIVA_15980 2.2e-07 IolE; sugar phosphate isomerase/epimerase; K03335 inosose dehydratase; Psort location: Cytoplasmic, score: 8.96.
       0.782
KXK67120.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: cfu:CFU_2103 1.1e-21 rbsC; putative fucose ABC transporter permease K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
       0.747
KXK64121.1
AP endonuclease, family 2; KEGG: zga:zobellia_919 1.4e-28 D-tagatose 3-epimerase; Psort location: Cytoplasmic, score: 8.96.
 
     0.679
KXK64211.1
AP endonuclease, family 2; KEGG: rba:RB11728 6.5e-38 tagatose 3-epimerase; Psort location: Cytoplasmic, score: 8.96.
 
     0.678
KXK64581.1
AP endonuclease, family 2; KEGG: rba:RB11728 4.5e-30 tagatose 3-epimerase; Psort location: Cytoplasmic, score: 8.96.
 
     0.662
KXK67058.1
AP endonuclease, family 2; KEGG: rba:RB11728 4.3e-34 tagatose 3-epimerase; Psort location: Cytoplasmic, score: 8.96.
 
     0.651
KXK65557.1
AP endonuclease, family 2; KEGG: rba:RB11728 3.8e-26 tagatose 3-epimerase; Psort location: Cytoplasmic, score: 8.96.
 
     0.600
KXK67121.1
Sugar-binding domain protein; KEGG: hor:Hore_22710 3.9e-07 sugar ABC transporter periplasmic protein K10439.
       0.545
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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