STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK67060.1KEGG: cai:Caci_4321 0.0017 LacI family transcriptional regulator. (35 aa)    
Predicted Functional Partners:
KXK67061.1
Sugar-binding domain protein; KEGG: fno:Fnod_0418 7.4e-30 alanine racemase K02529; Psort location: Cytoplasmic, score: 9.97.
       0.503
KXK64667.1
Phosphocarrier, HPr family; KEGG: cex:CSE_14490 1.5e-15 ptsH; phosphocarrier protein HPr K11189; Psort location: Cytoplasmic, score: 9.26.
   
 
 0.469
KXK67058.1
AP endonuclease, family 2; KEGG: rba:RB11728 4.3e-34 tagatose 3-epimerase; Psort location: Cytoplasmic, score: 8.96.
  
    0.439
Pyk
Pyruvate kinase; KEGG: cpy:Cphy_0741 1.6e-185 pyruvate kinase; K00873 pyruvate kinase; Psort location: Cytoplasmic, score: 9.97.
    
 
 0.425
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.