STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK67068.1KEGG: pjd:Pjdr2_5110 1.4e-32 AraC family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97. (324 aa)    
Predicted Functional Partners:
KXK65940.1
Transcriptional regulator, AraC family; KEGG: zga:zobellia_1031 8.9e-10 one-component system sensor protein; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.823
KXK66656.1
KEGG: gym:GYMC10_3774 3.8e-17 AraC family transcriptional regulator K13530; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.812
KXK65713.1
Transcriptional regulator, AraC family; KEGG: cbe:Cbei_2175 3.1e-11 2-isopropylmalate synthase; K01649 2-isopropylmalate synthase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.803
KXK67069.1
KEGG: nda:Ndas_5559 3.0e-40 xylose isomerase K01805; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.750
KXK65517.1
Transcriptional regulator, AraC family; KEGG: lsp:Bsph_1999 5.7e-09 adaA; methylphosphotriester-DNA alkyltransferase; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.686
KXK66735.1
Transcriptional regulator, AraC family; KEGG: bha:BH0394 3.4e-09 adaA; methylphosphotriester-DNA alkyltransferase K13530; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.597
KXK66373.1
KEGG: pmq:PM3016_1208 1.2e-10 AdaA protein; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
 
0.586
KXK67067.1
Kinase, PfkB family; KEGG: amv:ACMV_11830 7.2e-32 putative sugar kinase; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.580
sigA
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
   
 
 0.559
KXK64161.1
KEGG: fta:FTA_1110 1.5e-13 rpoD; RNA polymerase sigma-70 factor K03086; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.559
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.