STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK67044.1Hypothetical protein; Psort location: OuterMembrane, score: 9.49. (2231 aa)    
Predicted Functional Partners:
KXK67045.1
Hypothetical protein; KEGG: eel:EUBELI_01267 0.00041 N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase.
       0.661
KXK67043.1
Hypothetical protein; KEGG: dwi:Dwil_GK16276 0.0041 GK16276 gene product from transcript GK16276-RA; K12823 ATP-dependent RNA helicase DDX5/DBP2; Psort location: OuterMembrane, score: 9.49.
       0.633
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.560
KXK65377.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
    0.517
KXK64614.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
    0.517
KXK67026.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
    
 
 0.465
KXK66437.1
Hypothetical protein.
    
 
 0.465
KXK66362.1
Hypothetical protein.
    
 
 0.465
KXK64716.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: cfu:CFU_1278 5.5e-05 yapH; outer membrane autotransporter barrel; Psort location: Extracellular, score: 9.65.
    
 
 0.465
KXK64510.1
KEGG: cyb:CYB_0466 2.4e-12 protein kinase K00870.
    
 
 0.465
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.