STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK67041.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (139 aa)    
Predicted Functional Partners:
KXK67040.1
Hypothetical protein.
       0.773
KXK67042.1
Ser/Thr phosphatase family protein; KEGG: mem:Memar_0045 0.0068 DNA polymerase II small subunit K02323; Psort location: Cytoplasmic, score: 8.96.
       0.773
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.700
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.689
KXK67039.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.654
KXK67036.1
Hypothetical protein.
       0.642
KXK67037.1
Hypothetical protein.
       0.642
KXK67038.1
Hypothetical protein.
       0.642
KXK64804.1
KEGG: eat:EAT1b_2077 2.1e-09 serine-protein kinase RsbW; K04757 anti-sigma B factor; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.581
KXK64806.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: glo:Glov_2102 3.5e-07 anti-sigma regulatory factor, serine/threonine protein kinase; K04757 anti-sigma B factor.
  
 
 0.581
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.