STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK66948.1Hypothetical protein; KEGG: bse:Bsel_0552 0.0026 metalloendopeptidase; Psort location: Cytoplasmic, score: 8.96. (106 aa)    
Predicted Functional Partners:
KXK66946.1
KEGG: shn:Shewana3_3590 1.1e-09 single-strand binding protein K03111; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.793
KXK66945.1
Hypothetical protein; KEGG: sua:Saut_1828 0.0087 NADH dehydrogenase subunit G K00336; Psort location: Cytoplasmic, score: 8.96.
       0.783
KXK66947.1
Hypothetical protein.
       0.773
KXK66949.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXK66950.1
Hypothetical protein.
       0.773
KXK66664.1
TraG/TraD family protein; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.502
KXK66420.1
Transcriptional activator RinB; Psort location: CytoplasmicMembrane, score: 9.82.
   
 
 0.502
KXK66001.1
TraG/TraD family protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.502
KXK66455.1
DNA binding domain, excisionase family.
  
  
 0.470
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.