STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK66869.1Acetyltransferase, GNAT family; KEGG: hor:Hore_02910 8.5e-13 Acetyltransferase; Psort location: Cytoplasmic, score: 8.96. (175 aa)    
Predicted Functional Partners:
carB
KEGG: cth:Cthe_1868 0. carbamoyl-phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit; Psort location: Cytoplasmic, score: 9.97.
      0.842
KXK65364.1
Repeat protein; KEGG: isc:IscW_ISCW000348 6.6e-31 secreted mucin MUC17, putative; Psort location: OuterMembrane, score: 8.59.
 
     0.619
KXK65177.1
Hypothetical protein.
  
     0.612
KXK66871.1
Putative succinylornithine transaminase; KEGG: mas:Mahau_1550 1.0e-96 acetylornithine aminotransferase; Psort location: Cytoplasmic, score: 9.97.
       0.605
KXK65499.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.605
KXK65239.1
Hypothetical protein; KEGG: cfl:Cfla_0905 2.1e-08 glycoside hydrolase family protein; K01181 endo-1,4-beta-xylanase.
  
     0.598
KXK66884.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: mma:MM_0211 5.3e-41 cysteine proteinase; K01376.
  
     0.571
KXK66620.1
Repeat protein; KEGG: cfu:CFU_1278 3.0e-17 yapH; outer membrane autotransporter barrel.
 
     0.558
KXK65506.1
DnaD domain protein.
  
     0.556
KXK64807.1
Putative membrane fusion protein.
 
     0.548
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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