STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK66777.1KEGG: csh:Closa_0973 1.6e-162 dihydrodipicolinate reductase; K00215 dihydrodipicolinate reductase; Psort location: Cytoplasmic, score: 8.96. (346 aa)    
Predicted Functional Partners:
dapL
LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.
     
  0.499
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
     
  0.499
KXK66778.1
Hypothetical protein; KEGG: eci:UTI89_C1627 2.5e-13 entS; EntS/YbdA MFS transporter K12516; Psort location: Extracellular, score: 9.46.
       0.498
KXK66774.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_1698 1.7e-62 phosphonate-transporting ATPase K02003; Psort location: CytoplasmicMembrane, score: 9.99.
       0.486
KXK66775.1
KEGG: stp:Strop_0048 3.3e-05 protein kinase; K08884 serine/threonine protein kinase, bacterial.
       0.486
KXK66776.1
Efflux ABC transporter, permease protein; KEGG: sgg:SGGBAA2069_c13190 2.3e-21 ABC transporter permease K02004; Psort location: CytoplasmicMembrane, score: 10.00.
       0.486
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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