STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK66720.1BMC domain protein; KEGG: efi:OG1RF_11339 2.6e-11 rnc; ribonuclease III. (199 aa)    
Predicted Functional Partners:
KXK66716.1
Putative carbon dioxide concentrating mechanism protein CcmL.
 
 
 0.971
KXK66715.1
BMC domain protein; KEGG: efi:OG1RF_11339 2.7e-05 rnc; ribonuclease III.
 
  
 0.942
KXK66719.1
Major carboxysome shell protein 1A family protein; KEGG: efi:OG1RF_11339 9.2e-16 rnc; ribonuclease III; Psort location: Cytoplasmic, score: 8.96.
 
   
0.845
KXK66718.1
Major carboxysome shell protein 1A; KEGG: efi:OG1RF_11339 1.3e-23 rnc; ribonuclease III; Psort location: Cytoplasmic, score: 8.96.
 
   
0.836
KXK66717.1
Major carboxysome shell protein 1A; KEGG: efi:OG1RF_11339 3.8e-26 rnc; ribonuclease III.
 
   
0.808
KXK64209.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.601
KXK66713.1
Carbohydrate kinase, FGGY family protein; KEGG: cpy:Cphy_3154 6.5e-70 carbohydrate kinase FGGY; K00848 rhamnulokinase; Psort location: Cytoplasmic, score: 8.96.
     
 0.592
KXK66714.1
KEGG: cap:CLDAP_39400 2.7e-25 putative aldolase class II protein; K01628 L-fuculose-phosphate aldolase; Psort location: Cytoplasmic, score: 8.96.
       0.582
KXK66721.1
Hypothetical protein.
       0.442
KXK66712.1
Sugar-binding domain protein; KEGG: hor:Hore_22710 4.2e-27 sugar ABC transporter periplasmic protein K10439; Psort location: Periplasmic, score: 9.76.
       0.439
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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