STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK66677.1Hypothetical protein. (62 aa)    
Predicted Functional Partners:
KXK66676.1
Hypothetical protein; KEGG: hel:HELO_1001 0.0024 dnaA; chromosomal replication initiation protein K02313; Psort location: Cytoplasmic, score: 8.96.
 
     0.948
KXK66675.1
Replication initiator protein A.
 
     0.947
KXK66673.1
KEGG: efc:EFAU004_00298 7.3e-05 Relaxase/mobilization nuclease domain protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.938
KXK66672.1
Bacterial mobilization protein MobC; KEGG: rde:RD1_A0111 7.5e-05 virD1; type IV secretion system T-DNA border endonuclease VirD1 K01175.
 
     0.935
KXK66674.1
Hypothetical protein.
 
     0.932
KXK66678.1
TnpX site-specific recombinase family protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.883
KXK66669.1
Hypothetical protein.
 
     0.773
KXK66688.1
Hypothetical protein.
 
     0.770
KXK66668.1
Sigma-70, region 4; KEGG: efc:EFAU004_02773 7.9e-10 DNA-directed RNA polymerase specialized sigma subunit.
  
     0.755
KXK66667.1
Methyltransferase domain protein; KEGG: npu:Npun_F5437 7.5e-21 methyltransferase type 11; Psort location: Cytoplasmic, score: 8.96.
  
     0.746
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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