STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK66562.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86. (86 aa)    
Predicted Functional Partners:
KXK66563.1
Hypothetical protein.
       0.773
KXK66564.1
Acetyltransferase, GNAT family; KEGG: sgg:SGGBAA2069_c04510 3.8e-42 N-acetyltransferase GCN5; Psort location: Cytoplasmic, score: 8.96.
       0.538
rplM
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
       0.499
rpsI
Ribosomal protein S9; KEGG: apb:SAR116_0492 7.2e-32 30S ribosomal protein S9 K02996; Psort location: Cytoplasmic, score: 9.26; Belongs to the universal ribosomal protein uS9 family.
       0.470
KXK66558.1
Hypothetical protein.
       0.417
KXK66559.1
Hypothetical protein.
       0.417
KXK66557.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.407
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.