STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK66444.1Bacterial mobilization protein MobC. (110 aa)    
Predicted Functional Partners:
KXK66443.1
KEGG: efc:EFAU004_00298 8.3e-13 Relaxase/mobilization nuclease domain protein; Psort location: Cytoplasmic, score: 8.96.
     0.883
KXK66442.1
Hypothetical protein.
 
     0.819
KXK66663.1
Hypothetical protein.
  
     0.772
KXK66679.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.772
KXK66684.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86.
  
     0.771
KXK66665.1
Hypothetical protein.
  
     0.769
KXK66680.1
Hypothetical protein.
  
     0.767
KXK66664.1
TraG/TraD family protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.765
KXK66681.1
Hypothetical protein.
  
     0.764
KXK66662.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.762
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.