STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK66445.1Phage integrase, SAM-like domain protein; KEGG: apb:SAR116_1915 1.2e-11 tyrosine recombinase XerD K04763; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family. (278 aa)    
Predicted Functional Partners:
KXK66841.1
Site-specific recombinase, phage integrase family; KEGG: bsr:I33_1800 1.5e-13 xerC; ATP-dependent protease HslV K03733; Psort location: Cytoplasmic, score: 9.26; Belongs to the 'phage' integrase family.
  
     0.590
KXK66449.1
Hypothetical protein; KEGG: rsp:RSP_0157 4.0e-11 Beta-mannanase K01179; Belongs to the glycosyl hydrolase 26 family.
  
     0.541
hslV
ATP-dependent protease HslVU, peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
  
  
 0.447
KXK65946.1
KEGG: tet:TTHERM_01080450 1.3e-06 Major Facilitator Superfamily protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.431
KXK64042.1
Transporter, major facilitator family protein; KEGG: raa:Q7S_10845 9.4e-05 araH; L-arabinose transporter permease K10538; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.421
KXK66448.1
Glycosyltransferase, group 2 family protein; KEGG: snx:SPNOXC_03600 1.1e-163 cap3B; serotype 3 capsule synthase; K00752 hyaluronan synthase; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.420
KXK64288.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.415
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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