STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK66455.1DNA binding domain, excisionase family. (67 aa)    
Predicted Functional Partners:
KXK66457.1
Site-specific recombinase, phage integrase family; KEGG: bsr:I33_1800 5.5e-09 xerC; ATP-dependent protease HslV K03733; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
 
   
 0.953
KXK66456.1
Hypothetical protein.
       0.773
KXK66903.1
Hypothetical protein; KEGG: smb:smi_1339 4.2e-11 pnpA; polyribonucleotide nucleotidyltransferase.
 
     0.772
KXK66902.1
Sigma-70, region 4; KEGG: efc:EFAU004_02773 2.4e-15 DNA-directed RNA polymerase specialized sigma subunit.
  
     0.770
KXK66451.1
KEGG: efc:EFAU004_02773 7.2e-48 DNA-directed RNA polymerase specialized sigma subunit.
 
     0.760
KXK67077.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.756
KXK67076.1
Replication initiation factor; Psort location: Cytoplasmic, score: 8.96.
  
     0.747
KXK65288.1
Site-specific recombinase, phage integrase family; KEGG: bqy:MUS_1239 1.2e-21 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein); Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
 
   
 0.686
KXK66666.1
KEGG: ase:ACPL_5664 9.1e-64 fusA; elongation factor G K02355; Psort location: Cytoplasmic, score: 9.97.
  
   
 0.576
KXK65285.1
DNA binding domain, excisionase family.
  
     0.502
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.