STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK66355.1Hypothetical protein. (61 aa)    
Predicted Functional Partners:
KXK66354.1
Phage integrase, SAM-like domain protein; KEGG: pfe:PSF113_1062 1.7e-12 xerD; XerD protein K04763; Psort location: Cytoplasmic, score: 9.97; Belongs to the 'phage' integrase family.
       0.773
KXK66356.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.96.
       0.631
KXK66357.1
KEGG: efu:HMPREF0351_12109 1.3e-05 TetR/AcrR family transcriptional regulator; Psort location: Cytoplasmic, score: 8.96.
       0.631
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.