STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK66361.1KEGG: bbl:BLBBGE_535 0.0061 septum formation initiator-related protein. (123 aa)    
Predicted Functional Partners:
KXK64164.1
POTRA domain protein, FtsQ-type; Essential cell division protein.
   
 
 0.890
KXK64170.1
Putative cell division protein FtsL; KEGG: tgu:100226701 3.5e-05 mitogen-activated protein kinase kinase kinase kinase 4; K04407 mitogen-activated protein kinase kinase kinase kinase 4.
    
 
 0.872
KXK66360.1
Putative bacteriochlorophyll 4-vinyl reductase; KEGG: fnu:FN0392 2.0e-45 oxygen-independent coproporphyrinogen III oxidase K00540; Psort location: Cytoplasmic, score: 9.97.
       0.498
KXK66362.1
Hypothetical protein.
       0.485
KXK64169.1
Penicillin-binding protein dimerization domain protein; KEGG: mas:Mahau_1596 6.7e-100 stage V sporulation protein D K08384; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.412
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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