STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK66364.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (233 aa)    
Predicted Functional Partners:
KXK65364.1
Repeat protein; KEGG: isc:IscW_ISCW000348 6.6e-31 secreted mucin MUC17, putative; Psort location: OuterMembrane, score: 8.59.
  
     0.694
KXK66804.1
Repeat protein; KEGG: cfu:CFU_1278 2.0e-23 yapH; outer membrane autotransporter barrel.
  
     0.633
KXK66884.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: mma:MM_0211 5.3e-41 cysteine proteinase; K01376.
  
     0.631
KXK66620.1
Repeat protein; KEGG: cfu:CFU_1278 3.0e-17 yapH; outer membrane autotransporter barrel.
  
     0.624
KXK65707.1
YbaK/proline--tRNA ligase associated domain protein; KEGG: epr:EPYR_02784 0.0087 ybaK; Prolyl-tRNA synthetase; Psort location: Cytoplasmic, score: 8.96.
 
     0.584
KXK65490.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.563
KXK64354.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.529
KXK65239.1
Hypothetical protein; KEGG: cfl:Cfla_0905 2.1e-08 glycoside hydrolase family protein; K01181 endo-1,4-beta-xylanase.
  
     0.520
KXK66953.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.509
KXK65266.1
Cna protein B-type domain protein; KEGG: cfl:Cfla_2912 1.8e-05 1,4-beta cellobiohydrolase; K01179 endoglucanase.
  
     0.478
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.