STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK66376.1ABC transporter, solute-binding protein; KEGG: ebe:B21_03255 3.1e-06 ugpB; ugpB, subunit of glycerol-3-P ABC transporter K05813; Psort location: Periplasmic, score: 9.84. (460 aa)    
Predicted Functional Partners:
KXK66371.1
ABC transporter, ATP-binding protein; KEGG: tep:TepRe1_0589 5.3e-107 glycerol-3-phosphate-transporting ATPase K10112; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the ABC transporter superfamily.
 
 0.951
KXK66377.1
ABC transporter, permease protein; KEGG: apb:SAR116_1511 3.6e-30 binding-protein-dependent transport system inner membrane protein K02025; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.936
KXK66378.1
ABC transporter, permease protein; KEGG: smt:Smal_2681 6.7e-36 monosaccharide-transporting ATPase K10190; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.934
KXK66379.1
KEGG: ttr:Tter_1959 4.0e-125 glycoside hydrolase family protein; K07406 alpha-galactosidase; Psort location: Cytoplasmic, score: 8.96.
 
    0.849
KXK65345.1
Hypothetical protein; KEGG: asu:Asuc_0081 1.1e-19 monosaccharide-transporting ATPase K10439; Psort location: Periplasmic, score: 9.76.
 
  
 0.641
KXK66626.1
Hypothetical protein; KEGG: cfu:CFU_2104 4.4e-48 putative fucose ABC transporter substrate-binding component K10439; Psort location: Periplasmic, score: 9.76.
 
  
 0.621
KXK65300.1
Oxidoreductase, NAD-binding domain protein; KEGG: ppo:PPM_2469 8.1e-95 M1_2785; inositol 2-dehydrogenase; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.612
KXK66462.1
KEGG: mas:Mahau_2319 1.3e-119 glycoside hydrolase K07406; Psort location: Cytoplasmic, score: 8.96.
 
    0.607
KXK66375.1
Hypothetical protein; Catalyzes the conversion of L-arabinose to L-ribulose.
 
  
 0.563
KXK66766.1
Sugar-binding domain protein; KEGG: cfu:CFU_1929 1.3e-30 rbsB; ABC sugar transporter, periplasmic ligand binding protein K10439; Psort location: Periplasmic, score: 9.76.
 
  
 0.561
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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