STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK66171.1CorA-like protein; KEGG: epr:EPYR_00218 6.4e-07 pldA; pldA K03284; Psort location: CytoplasmicMembrane, score: 7.88. (303 aa)    
Predicted Functional Partners:
KXK64803.1
STAS domain protein; KEGG: ava:Ava_0744 4.3e-07 anti-sigma-factor antagonist (STAS) and sugar transfersase; Psort location: Cytoplasmic, score: 8.96.
  
    0.594
KXK64805.1
RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; KEGG: snc:HMPREF0837_11413 1.2e-20 rpoD; DNA-directed RNA polymerase sigma subunit RpoD K03086; Psort location: Cytoplasmic, score: 9.97; Belongs to the sigma-70 factor family.
  
  
 0.579
KXK66172.1
Hypothetical protein.
       0.537
KXK64804.1
KEGG: eat:EAT1b_2077 2.1e-09 serine-protein kinase RsbW; K04757 anti-sigma B factor; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.537
argH
Argininosuccinate lyase; KEGG: pth:PTH_0517 2.8e-149 ArgH; argininosuccinate lyase; K01755 argininosuccinate lyase; Psort location: Cytoplasmic, score: 9.97.
       0.423
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.