STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK66211.1Putative ribulokinase; KEGG: ssm:Spirs_3429 1.7e-133 L-ribulokinase K00853; Psort location: Cytoplasmic, score: 9.97. (547 aa)    
Predicted Functional Partners:
KXK66375.1
Hypothetical protein; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 0.978
KXK65346.1
Hypothetical protein; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.972
AraD
KEGG: cbe:Cbei_0549 1.1e-67 araD; L-ribulose-5-phosphate 4-epimerase; K01786 L-ribulose-5-phosphate 4-epimerase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.962
KXK66657.1
Hypothetical protein; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.959
KXK66249.1
KEGG: elm:ELI_1366 8.7e-75 L-ribulose-5-phosphate 4-epimerase; K01786 L-ribulose-5-phosphate 4-epimerase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.958
AraD-2
KEGG: pjd:Pjdr2_4207 3.3e-59 araD; L-ribulose-5-phosphate 4-epimerase; K01786 L-ribulose-5-phosphate 4-epimerase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.956
araB
Ribulokinase; KEGG: csc:Csac_0721 3.1e-205 ribulokinase; K00853 L-ribulokinase; Psort location: Cytoplasmic, score: 9.97.
  
  
 
0.919
araB-2
Ribulokinase; KEGG: csc:Csac_0721 1.3e-208 ribulokinase; K00853 L-ribulokinase; Psort location: Cytoplasmic, score: 9.97.
  
  
 
0.919
KXK64973.1
KEGG: mfu:LILAB_14970 4.3e-57 ribulose-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase; Psort location: Cytoplasmic, score: 9.97.
   
 0.904
Rpe
Putative ribulose-phosphate 3-epimerase; KEGG: mas:Mahau_1767 4.0e-54 ribulose-5-phosphate 3-epimerase K01783; Psort location: Cytoplasmic, score: 9.97.
   
 0.904
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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