STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK66234.1Hypothetical protein. (59 aa)    
Predicted Functional Partners:
KXK66235.1
Hypothetical protein; KEGG: dar:Daro_3006 0.00074 PAS; K11527 two-component system, unclassified family, sensor histidine kinase and response regulator; Psort location: Cytoplasmic, score: 8.96.
       0.571
KXK66236.1
Diguanylate cyclase domain protein; KEGG: swp:swp_1405 4.4e-48 response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain-containing protein K07814; Psort location: CytoplasmicMembrane, score: 7.88.
       0.540
KXK66237.1
PAS domain S-box protein; KEGG: fsc:FSU_1642 7.4e-96 sensor histidine kinase/response regulator; Psort location: CytoplasmicMembrane, score: 7.88.
       0.510
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.