STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RbsC-4KEGG: ctu:CTU_42040 4.2e-59 rbsC; ribose ABC transporter permease K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. (323 aa)    
Predicted Functional Partners:
KXK66272.1
KEGG: vsa:VSAL_I1370 3.9e-63 rbsC; ribose ABC transporter permease protein K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
    
0.817
rbsA-2
Putative sugar ABC transporter, ATP binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 
 0.790
KXK65298.1
Sugar-binding domain protein; KEGG: tex:Teth514_0166 9.7e-44 monosaccharide-transporting ATPase K10439; Psort location: Periplasmic, score: 9.76.
   0.728
KXK66273.1
Sugar-binding domain protein; KEGG: cfu:CFU_2190 6.4e-31 ABC sugar transporter, periplasmic ligand binding protein K02058; Psort location: Periplasmic, score: 9.76.
   0.715
KXK64046.1
Sugar-binding domain protein; KEGG: bcy:Bcer98_0564 9.4e-46 monosaccharide-transporting ATPase K10439; Psort location: Periplasmic, score: 9.76.
   0.661
KXK65892.1
Sugar-binding domain protein; KEGG: bst:GYO_3955 1.6e-36 D-ribose-binding protein K10439; Psort location: Periplasmic, score: 9.76.
   0.585
KXK65937.1
Sugar-binding domain protein; KEGG: pmo:Pmob_0923 5.0e-31 monosaccharide-transporting ATPase K10439; Psort location: Periplasmic, score: 9.76.
   0.570
KXK65442.1
Sugar-binding domain protein; KEGG: nth:Nther_2685 9.6e-37 monosaccharide-transporting ATPase K10439; Psort location: Periplasmic, score: 9.76.
   0.570
KXK66208.1
Sugar-binding domain protein; KEGG: hor:Hore_22710 1.8e-49 sugar ABC transporter periplasmic protein K10439; Psort location: Periplasmic, score: 9.76.
   0.560
KXK65524.1
Sugar-binding domain protein; KEGG: nth:Nther_2685 4.8e-26 monosaccharide-transporting ATPase K10439; Psort location: Periplasmic, score: 9.76.
 
   0.536
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.