STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK66293.1Sugar-binding domain protein; KEGG: vsa:VSAL_I1369 1.3e-23 rbsB; D-ribose transporter subunit RbsB K10439; Psort location: Periplasmic, score: 9.76. (391 aa)    
Predicted Functional Partners:
KXK66108.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: nth:Nther_2686 9.0e-25 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.792
KXK66295.1
Putative ribose ABC transporter permease protein; KEGG: bac:BamMC406_4659 1.7e-62 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
   0.779
KXK64029.1
Hypothetical protein; KEGG: tpt:Tpet_1794 7.1e-20 monosaccharide-transporting ATPase K10439.
  
     0.774
KXK65717.1
Sugar-binding domain protein; KEGG: pmo:Pmob_0923 6.0e-28 monosaccharide-transporting ATPase K10439; Psort location: Periplasmic, score: 9.76.
  
     0.772
KXK66465.1
Hypothetical protein; KEGG: hor:Hore_22710 6.6e-22 sugar ABC transporter periplasmic protein K10439; Psort location: Periplasmic, score: 9.44.
  
     0.771
KXK65442.1
Sugar-binding domain protein; KEGG: nth:Nther_2685 9.6e-37 monosaccharide-transporting ATPase K10439; Psort location: Periplasmic, score: 9.76.
  
     0.768
KXK64031.1
Hypothetical protein; KEGG: tex:Teth514_0166 2.6e-18 monosaccharide-transporting ATPase K10439.
  
     0.768
KXK65737.1
Sugar-binding domain protein; KEGG: asu:Asuc_0081 4.1e-20 monosaccharide-transporting ATPase K10439; Psort location: Periplasmic, score: 9.76.
  
     0.706
KXK66093.1
Sugar-binding domain protein; KEGG: bmd:BMD_3626 1.2e-51 two-component sensor histidine kinase/response regulator; Psort location: Periplasmic, score: 9.76.
  
     0.700
KXK67120.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: cfu:CFU_2103 1.1e-21 rbsC; putative fucose ABC transporter permease K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.687
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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