STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK66302.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (165 aa)    
Predicted Functional Partners:
xylB-2
Xylulokinase; KEGG: pjd:Pjdr2_1830 3.5e-110 xylulokinase; K00854 xylulokinase; Psort location: Cytoplasmic, score: 9.97.
       0.773
deoC-3
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
       0.631
KXK66298.1
KEGG: ols:Olsu_0058 3.7e-83 transketolase subunit B K00615; Psort location: Cytoplasmic, score: 9.97.
       0.544
GldA
KEGG: elm:ELI_1587 1.1e-72 glycerol dehydrogenase; K00005 glycerol dehydrogenase; Psort location: Cytoplasmic, score: 8.96.
       0.544
KXK66297.1
Transketolase, thiamine diphosphate binding domain protein; KEGG: lrg:LRHM_0391 9.0e-73 putative transketolase; K00615 transketolase; Psort location: Cytoplasmic, score: 9.97.
       0.543
KXK66294.1
KEGG: ppt:PPS_2246 4.4e-135 ribose ABC transporter ATP-binding protein; K10441 ribose transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.411
KXK66295.1
Putative ribose ABC transporter permease protein; KEGG: bac:BamMC406_4659 1.7e-62 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
       0.411
KXK66296.1
Putative chlorophyll synthesis pathway protein BchC; KEGG: hor:Hore_13100 4.4e-71 L-threonine 3-dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
       0.411
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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