STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK66306.1Putative glycine betaine/carnitine/choline transport system permease protein opuCD; KEGG: saa:SAUSA300_0707 4.0e-38 osmoprotectant ABC transporter permease K05845:K05846; Psort location: CytoplasmicMembrane, score: 10.00. (217 aa)    
Predicted Functional Partners:
KXK66307.1
Putative glycine betaine/carnitine/choline-binding protein; KEGG: bya:BANAU_3295 1.2e-47 opuCC; glycine betaine/carnitine/choline ABC transporter K05845; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.999
KXK66308.1
ABC transporter, ATP-binding protein; KEGG: osp:Odosp_2943 2.7e-64 Polyamine-transporting ATPase K05847; Psort location: CytoplasmicMembrane, score: 7.88.
 0.998
KXK66309.1
Glyoxalase family protein; KEGG: mas:Mahau_1308 9.2e-16 glyoxalase/bleomycin resistance protein/dioxygenase; K01759 lactoylglutathione lyase; Psort location: Cytoplasmic, score: 8.96.
  
    0.575
KXK66305.1
Hypothetical protein.
       0.498
KXK65209.1
KEGG: cle:Clole_1571 4.3e-160 amidophosphoribosyltransferase K00764; Psort location: Cytoplasmic, score: 8.96; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
   
    0.493
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
   
    0.493
KXK66304.1
Hypothetical protein.
       0.440
KXK66303.1
4Fe-4S binding domain protein; KEGG: txy:Thexy_1048 2.3e-122 ferredoxin hydrogenase.
  
    0.415
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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