STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK66010.1Helicase protein; KEGG: ase:ACPL_5928 9.9e-210 F-box DNA helicase protein 1. (2395 aa)    
Predicted Functional Partners:
KXK66009.1
Hypothetical protein.
 
   
 0.876
KXK66008.1
Hypothetical protein.
 
   
 0.865
KXK66001.1
TraG/TraD family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.836
KXK66027.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
 
 0.830
KXK66005.1
KEGG: efc:EFAU004_00298 5.6e-18 Relaxase/mobilization nuclease domain protein; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.830
KXK66003.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.826
KXK65997.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.811
KXK66007.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.808
KXK65985.1
KEGG: vcj:VCD_003045 7.8e-58 hypothetical protein; K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.772
KXK65987.1
Hypothetical protein; KEGG: aco:Amico_0450 2.7e-41 restriction modification system DNA specificity domain-containing protein; K01154 type I restriction enzyme, S subunit.
  
 
 0.772
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.