STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK65886.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (113 aa)    
Predicted Functional Partners:
cysS
cysteine--tRNA ligase; KEGG: mas:Mahau_1472 2.2e-147 cysteinyl-tRNA synthetase K01883; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.732
KXK65885.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.523
KXK65883.1
Nucleotide-binding protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
       0.513
KXK65882.1
Oxidoreductase.
       0.512
KXK65888.1
Hypothetical protein; KEGG: smq:SinmeB_4567 4.7e-05 D-arabinono-1,4-lactone oxidase.
       0.452
KXK65889.1
Creatinase; KEGG: ttl:TtJL18_0992 1.0e-32 Xaa-Pro aminopeptidase; K01262 Xaa-Pro aminopeptidase; Psort location: Cytoplasmic, score: 9.97.
       0.429
KXK65890.1
Hypothetical protein; KEGG: tva:TVAG_484030 6.4e-05 glycosyl hydrolase; K12373 hexosaminidase; Psort location: Cytoplasmic, score: 8.96.
       0.429
KXK65891.1
Hypothetical protein; KEGG: reh:H16_A1780 6.7e-24 h16_A1780; translation initiation inhibitory endoribonuclease domain-containing protein; Psort location: Cytoplasmic, score: 8.96.
       0.429
KXK65892.1
Sugar-binding domain protein; KEGG: bst:GYO_3955 1.6e-36 D-ribose-binding protein K10439; Psort location: Periplasmic, score: 9.76.
       0.424
KXK65893.1
Putative ribose ABC transporter permease protein; KEGG: apr:Apre_1619 1.1e-67 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
       0.414
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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