STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK65927.1Radical SAM domain protein; KEGG: bbv:HMPREF9228_0352 2.0e-05 anaerobic sulfatase maturase K06871; Psort location: Cytoplasmic, score: 8.96. (493 aa)    
Predicted Functional Partners:
KXK65928.1
Hypothetical protein; Belongs to the UPF0145 family.
  
    0.621
KXK65929.1
Hypothetical protein; KEGG: bqy:MUS_3662 1.6e-20 yvgT; thioredoxin reductase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.562
KXK65926.1
Hypothetical protein.
       0.554
KXK66280.1
Nitrogen regulatory protein P-II; KEGG: psl:Psta_0819 2.7e-89 multi-sensor hybrid histidine kinase K03320; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the P(II) protein family.
  
  
 0.447
KXK65930.1
KEGG: srr:SerAS9_3545 0.00035 GntR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
  
    0.424
KXK64923.1
Putative protein, PH0010 family; KEGG: bpf:BpOF4_12625 8.5e-15 extradiol ring-cleavage dioxygenase class III; K00455 3,4-dihydroxyphenylacetate 2,3-dioxygenase; Psort location: Cytoplasmic, score: 8.96.
  
     0.408
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.