STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RbsC-5Putative ribose ABC transporter permease protein; KEGG: trq:TRQ2_0974 8.7e-75 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. (329 aa)    
Predicted Functional Partners:
KXK65936.1
Putative sugar ABC transporter, ATP binding protein; KEGG: taz:TREAZ_0832 2.4e-150 ribose import ATP-binding protein RbsA K10441; Psort location: CytoplasmicMembrane, score: 7.88.
 
   0.832
KXK65937.1
Sugar-binding domain protein; KEGG: pmo:Pmob_0923 5.0e-31 monosaccharide-transporting ATPase K10439; Psort location: Periplasmic, score: 9.76.
 
 0.773
KXK66208.1
Sugar-binding domain protein; KEGG: hor:Hore_22710 1.8e-49 sugar ABC transporter periplasmic protein K10439; Psort location: Periplasmic, score: 9.76.
 
 0.762
KXK64046.1
Sugar-binding domain protein; KEGG: bcy:Bcer98_0564 9.4e-46 monosaccharide-transporting ATPase K10439; Psort location: Periplasmic, score: 9.76.
 
 0.740
KXK65298.1
Sugar-binding domain protein; KEGG: tex:Teth514_0166 9.7e-44 monosaccharide-transporting ATPase K10439; Psort location: Periplasmic, score: 9.76.
 
 0.600
KXK65934.1
Hypothetical protein; KEGG: yph:YPC_4466 1.5e-47 ATP synthase subunit delta K09988.
      0.598
KXK65892.1
Sugar-binding domain protein; KEGG: bst:GYO_3955 1.6e-36 D-ribose-binding protein K10439; Psort location: Periplasmic, score: 9.76.
 
 0.588
KXK65932.1
Ketose-bisphosphate aldolase; KEGG: taz:TREAZ_0221 2.4e-104 putative fructose-bisphosphate aldolase 1; Psort location: Cytoplasmic, score: 9.97.
  
    0.587
KXK65933.1
Carbohydrate kinase, FGGY family protein; KEGG: tpe:Tpen_0894 4.8e-58 glycerol kinase K00854; Psort location: Cytoplasmic, score: 9.97.
  
    0.585
KXK65931.1
KEGG: cwo:Cwoe_4813 1.9e-06 L-fucose isomerase-like protein; K01804 L-arabinose isomerase; Psort location: Cytoplasmic, score: 8.96.
       0.581
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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