STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK65940.1Transcriptional regulator, AraC family; KEGG: zga:zobellia_1031 8.9e-10 one-component system sensor protein; Psort location: Cytoplasmic, score: 9.97. (281 aa)    
Predicted Functional Partners:
KXK67068.1
KEGG: pjd:Pjdr2_5110 1.4e-32 AraC family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.823
KXK65713.1
Transcriptional regulator, AraC family; KEGG: cbe:Cbei_2175 3.1e-11 2-isopropylmalate synthase; K01649 2-isopropylmalate synthase; Psort location: Cytoplasmic, score: 8.96.
  
     0.758
KXK65517.1
Transcriptional regulator, AraC family; KEGG: lsp:Bsph_1999 5.7e-09 adaA; methylphosphotriester-DNA alkyltransferase; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 9.97.
  
     0.611
KXK66735.1
Transcriptional regulator, AraC family; KEGG: bha:BH0394 3.4e-09 adaA; methylphosphotriester-DNA alkyltransferase K13530; Psort location: Cytoplasmic, score: 9.97.
  
     0.593
KXK64934.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: aca:ACP_2198 1.7e-10 histidine kinase K15011; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.553
KXK66373.1
KEGG: pmq:PM3016_1208 1.2e-10 AdaA protein; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
 
0.484
KXK65831.1
Diguanylate cyclase domain protein; KEGG: pfe:PSF113_0499 4.9e-51 sensory box-containing diguanylate cyclase; Psort location: CytoplasmicMembrane, score: 7.88.
  
  
 0.462
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.447
KXK65939.1
Sugar-binding domain protein; KEGG: pmo:Pmob_0832 3.0e-42 LacI family transcription regulator K02529; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.439
KXK65223.1
AlkA protein; KEGG: aoe:Clos_0146 4.7e-202 AraC family transcriptional regulator; K13529 AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.408
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.