STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK65810.1Hypothetical protein. (66 aa)    
Predicted Functional Partners:
KXK65811.1
Hypothetical protein; KEGG: ssr:SALIVB_2089 3.8e-26 tyrosyl-tRNA synthetase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.693
KXK65812.1
4Fe-4S binding domain protein; KEGG: fpl:Ferp_0893 2.0e-07 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; K00171 pyruvate ferredoxin oxidoreductase, delta subunit; Psort location: Cytoplasmic, score: 8.96.
       0.505
KXK65809.1
Putative 5-nitroimidazole antibiotic resistance protein NimB; Psort location: Cytoplasmic, score: 8.96.
       0.458
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.