STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK65779.1KEGG: bde:BDP_1067 2.8e-07 amino acid permease; Psort location: CytoplasmicMembrane, score: 10.00. (468 aa)    
Predicted Functional Partners:
aguA
Agmatine deiminase; KEGG: lbh:Lbuc_0316 4.5e-149 Agmatine deiminase K10536; Psort location: Cytoplasmic, score: 9.97.
   
 0.842
KXK65902.1
KEGG: clj:CLJU_c42560 2.9e-131 ornithine carbamoyltransferase K13252; Psort location: Cytoplasmic, score: 9.97; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
 
  
 0.755
KXK64850.1
SIS domain protein; KEGG: bao:BAMF_0788 1.2e-15 malR1; transcriptional activator K03481; Psort location: Cytoplasmic, score: 8.96.
 
    0.712
KXK66344.1
LPXTG-motif protein cell wall anchor domain protein.
   
 0.545
KXK64744.1
Cytoplasmic alpha-amylase; KEGG: elm:ELI_4330 5.3e-162 alpha amylase; K01176 alpha-amylase; Psort location: Cytoplasmic, score: 9.97.
   
 0.545
KXK64768.1
Alpha amylase, catalytic domain protein; KEGG: ssg:Selsp_2025 4.5e-126 4-alpha-glucanotransferase K00705; Psort location: Cytoplasmic, score: 9.97; Belongs to the glycosyl hydrolase 13 family.
   
 0.545
KXK64097.1
KEGG: gyc:GYMC61_3273 9.2e-174 alpha-amylase K01176; Psort location: Cytoplasmic, score: 9.26.
   
 0.545
KXK65777.1
VanZ-like protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.487
KXK66741.1
KEGG: cpr:CPR_2029 1.7e-174 glutamate decarboxylase K01580; Psort location: Cytoplasmic, score: 9.97; Belongs to the group II decarboxylase family.
 
  
 0.485
Pap
KEGG: ipo:Ilyop_2305 2.3e-106 Polyphosphate:AMP phosphotransferase; Psort location: Cytoplasmic, score: 9.97.
  
    0.453
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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