STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK65605.1ACT domain protein; KEGG: fpl:Ferp_0598 3.6e-10 phosphoserine phosphatase SerB K01079; Psort location: Cytoplasmic, score: 8.96. (90 aa)    
Predicted Functional Partners:
KXK65606.1
Hypothetical protein; KEGG: rdn:HMPREF0733_11258 2.0e-148 glycerol-3-phosphate dehydrogenase K09157; Psort location: Cytoplasmic, score: 8.96.
 
     0.935
KXK65604.1
Hypothetical protein; KEGG: pjd:Pjdr2_3138 0.00062 glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.590
KXK65603.1
Hypothetical protein.
       0.548
KXK65602.1
TIGR00730 family protein; KEGG: mct:MCR_0842 1.8e-28 putative lysine decarboxylase K06966; Psort location: Cytoplasmic, score: 9.26; Belongs to the LOG family.
       0.493
KXK65174.1
Putative DNA internalization competence protein ComEC/Rec2-like protein; KEGG: apb:SAR116_0501 1.7e-10 DNA uptake protein ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.488
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.