STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK65633.1ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 10.00. (260 aa)    
Predicted Functional Partners:
KXK65632.1
KEGG: llk:LLKF_1217 7.0e-57 ABC transporter ATP-binding protein K09687; Psort location: CytoplasmicMembrane, score: 7.88.
       0.810
KXK65631.1
LysR substrate binding domain protein; KEGG: dac:Daci_2016 9.9e-19 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.
  
  
 0.527
KXK66888.1
Nitroreductase family protein; KEGG: fnu:FN1254 8.7e-27 dihydropteridine reductase K00540; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.492
KXK65975.1
Nitroreductase family protein; KEGG: mth:MTH120 2.4e-40 NADPH-oxidoreductase; K00540.
  
  
 0.492
KXK65818.1
Hypothetical protein.
  
  
 0.492
KXK64321.1
Nitroreductase family protein; KEGG: mmp:MMP0115 2.7e-39 nitroreductase K00540.
  
  
 0.492
KXK64018.1
KEGG: cbn:CbC4_1014 4.3e-18 noxC; nitroreductase family protein.
  
  
 0.492
KXK66899.1
Efflux ABC transporter, permease protein; KEGG: sgg:SGGBAA2069_c11620 2.7e-103 putative ABC transporter permease K02004; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.410
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.