STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK65650.1LPXTG-motif protein cell wall anchor domain protein; KEGG: bbf:BBB_1512 3.6e-09 beta-hexosaminidase alpha chain K12373. (190 aa)    
Predicted Functional Partners:
SrtB-4
Sortase, SrtB family; KEGG: lsg:lse_2161 1.3e-34 hypothetical protein; K08600 sortase B.
  
    0.791
KXK65363.1
Bacterial group 3 Ig-like protein; KEGG: bbp:BBPR_1529 1.8e-13 nagZ; beta-n-acetylhexosaminidase NagZ K12373.
     
0.783
KXK65648.1
NlpC/P60 family protein; KEGG: dma:DMR_33420 6.8e-11 cheA; chemotaxis protein CheA; K03407 two-component system, chemotaxis family, sensor kinase CheA.
  
  
 0.667
sepF
Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
       0.535
KXK65364.1
Repeat protein; KEGG: isc:IscW_ISCW000348 6.6e-31 secreted mucin MUC17, putative; Psort location: OuterMembrane, score: 8.59.
       0.527
KXK65646.1
Hypothetical protein.
       0.497
KXK65645.1
Hypothetical protein.
       0.482
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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