STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK65369.1Hypothetical protein; KEGG: rop:ROP_41260 3.1e-19 dnaX; DNA polymerase III subunits gamma and tau K02343. (308 aa)    
Predicted Functional Partners:
KXK65367.1
Hypothetical protein; KEGG: dpt:Deipr_0229 3.3e-06 V-type proton ATPase subunit E; K02121 V-type H+-transporting ATPase subunit E; Psort location: Cytoplasmic, score: 8.96.
       0.757
KXK65368.1
Hypothetical protein.
       0.757
KXK65364.1
Repeat protein; KEGG: isc:IscW_ISCW000348 6.6e-31 secreted mucin MUC17, putative; Psort location: OuterMembrane, score: 8.59.
 
    0.719
KXK65239.1
Hypothetical protein; KEGG: cfl:Cfla_0905 2.1e-08 glycoside hydrolase family protein; K01181 endo-1,4-beta-xylanase.
  
     0.713
KXK65370.1
LytTr DNA-binding domain protein; KEGG: ppo:PPM_2376 2.7e-16 lytTr; chemotaxis response regulator protein-glutamate methylesterase 1; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.708
LepB-2
KEGG: eha:Ethha_0440 6.2e-33 signal peptidase I; K03100 signal peptidase I; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the peptidase S26 family.
 
   
 0.692
KXK65366.1
Hypothetical protein; KEGG: edi:EDI_201440 4.2e-07 villin; Psort location: Cytoplasmic, score: 8.96.
       0.679
KXK65371.1
KEGG: apb:SAR116_0013 9.8e-12 BadM/Rrf2 family transcriptional regulator.
       0.645
KXK66496.1
Repeat protein; KEGG: ddi:DDB_G0271134 5.7e-08 celA; cellulase 270-6; K01179 endoglucanase.
 
     0.618
KXK66620.1
Repeat protein; KEGG: cfu:CFU_1278 3.0e-17 yapH; outer membrane autotransporter barrel.
 
  
 0.606
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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