STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK65393.1Flavodoxin family protein; KEGG: ftm:FTM_1631 0.00022 wrbA; trp repressor binding protein K03809; Psort location: Cytoplasmic, score: 8.96. (161 aa)    
Predicted Functional Partners:
KXK65395.1
Cupin domain protein; KEGG: afd:Alfi_3236 2.7e-41 hypothetical protein; K01607 4-carboxymuconolactone decarboxylase.
     0.873
KXK65394.1
Tautomerase enzyme; KEGG: tsu:Tresu_1855 6.2e-10 4-oxalocrotonate tautomerase; K01821 4-oxalocrotonate tautomerase.
   
   0.792
KXK65396.1
Alcohol dehydrogenase, iron-dependent; KEGG: rho:RHOM_16595 2.4e-143 hypothetical protein; K00001 alcohol dehydrogenase; Psort location: Cytoplasmic, score: 9.26.
 
    0.777
KXK65392.1
Hypothetical protein.
 
    
0.658
KXK65391.1
Hypothetical protein; KEGG: bce:BC0375 1.1e-10 methyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.585
NifJ
KEGG: mta:Moth_0064 0. pyruvate:ferredoxin (flavodoxin) oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: CytoplasmicMembrane, score: 9.46.
     
 0.496
KXK65397.1
KEGG: bfs:BF1277 1.4e-106 zinc-binding alcohol dehydrogenase; K00100; Psort location: Cytoplasmic, score: 9.97.
       0.464
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.