STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK65431.1KEGG: efc:EFAU004_00298 1.1e-13 Relaxase/mobilization nuclease domain protein; Psort location: Cytoplasmic, score: 8.96. (357 aa)    
Predicted Functional Partners:
KXK65432.1
Orf 9 family protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.795
KXK65273.1
Hypothetical protein; KEGG: ase:ACPL_5928 1.1e-125 F-box DNA helicase protein 1; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.691
KXK65430.1
Hypothetical protein.
       0.686
KXK66420.1
Transcriptional activator RinB; Psort location: CytoplasmicMembrane, score: 9.82.
 
   
 0.685
KXK66684.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86.
 
     0.663
KXK66001.1
TraG/TraD family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.630
KXK66411.1
Toprim domain protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.606
KXK66410.1
Helicase protein; KEGG: ase:ACPL_5928 1.6e-52 F-box DNA helicase protein 1; Psort location: Cytoplasmic, score: 8.96.
 
     0.595
KXK66664.1
TraG/TraD family protein; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.594
KXK66427.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.27.
 
   
 0.594
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.