STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RbsC-7Putative ribose ABC transporter permease protein; KEGG: ach:Achl_0148 1.8e-58 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. (337 aa)    
Predicted Functional Partners:
KXK65442.1
Sugar-binding domain protein; KEGG: nth:Nther_2685 9.6e-37 monosaccharide-transporting ATPase K10439; Psort location: Periplasmic, score: 9.76.
   0.922
KXK65298.1
Sugar-binding domain protein; KEGG: tex:Teth514_0166 9.7e-44 monosaccharide-transporting ATPase K10439; Psort location: Periplasmic, score: 9.76.
   0.744
KXK65445.1
Sugar-binding domain protein; KEGG: pmo:Pmob_0923 1.1e-26 monosaccharide-transporting ATPase K10439; Psort location: Periplasmic, score: 9.76.
   0.737
KXK66208.1
Sugar-binding domain protein; KEGG: hor:Hore_22710 1.8e-49 sugar ABC transporter periplasmic protein K10439; Psort location: Periplasmic, score: 9.76.
   0.711
KXK64046.1
Sugar-binding domain protein; KEGG: bcy:Bcer98_0564 9.4e-46 monosaccharide-transporting ATPase K10439; Psort location: Periplasmic, score: 9.76.
   0.658
KXK65937.1
Sugar-binding domain protein; KEGG: pmo:Pmob_0923 5.0e-31 monosaccharide-transporting ATPase K10439; Psort location: Periplasmic, score: 9.76.
   0.634
KXK65892.1
Sugar-binding domain protein; KEGG: bst:GYO_3955 1.6e-36 D-ribose-binding protein K10439; Psort location: Periplasmic, score: 9.76.
   0.602
KXK66815.1
Hypothetical protein; KEGG: aau:AAur_1889 4.2e-27 rbsB; D-ribose-binding protein K10439; Psort location: Periplasmic, score: 9.76.
   0.582
KXK65958.1
Sugar-binding domain protein; KEGG: aau:AAur_1889 2.4e-56 rbsB; D-ribose-binding protein K10439; Psort location: Periplasmic, score: 9.76.
   0.570
KXK66712.1
Sugar-binding domain protein; KEGG: hor:Hore_22710 4.2e-27 sugar ABC transporter periplasmic protein K10439; Psort location: Periplasmic, score: 9.76.
 
   0.547
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.