STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK65517.1Transcriptional regulator, AraC family; KEGG: lsp:Bsph_1999 5.7e-09 adaA; methylphosphotriester-DNA alkyltransferase; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 9.97. (344 aa)    
Predicted Functional Partners:
KXK67088.1
ABC transporter, ATP-binding protein; KEGG: tbe:Trebr_1032 3.1e-157 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.721
KXK67089.1
ABC transporter, ATP-binding protein; KEGG: tbe:Trebr_1031 1.0e-144 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.716
KXK66373.1
KEGG: pmq:PM3016_1208 1.2e-10 AdaA protein; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.715
KXK66656.1
KEGG: gym:GYMC10_3774 3.8e-17 AraC family transcriptional regulator K13530; Psort location: Cytoplasmic, score: 9.26.
 
     0.709
KXK67068.1
KEGG: pjd:Pjdr2_5110 1.4e-32 AraC family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.686
KXK65454.1
KEGG: bcz:BCZK3497 1.1e-17 adaA; AraC family transcriptional regulator K13530; Psort location: Cytoplasmic, score: 9.26.
  
     0.676
KXK65386.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.672
KXK65385.1
KEGG: sgg:SGGBAA2069_c11570 1.7e-71 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.657
KXK65940.1
Transcriptional regulator, AraC family; KEGG: zga:zobellia_1031 8.9e-10 one-component system sensor protein; Psort location: Cytoplasmic, score: 9.97.
  
     0.611
KXK65388.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.96.
  
   
 0.599
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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