STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK65253.1Hypothetical protein. (177 aa)    
Predicted Functional Partners:
KXK64907.1
Hypothetical protein; KEGG: apb:SAR116_1080 1.1e-52 electron transfer protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.443
KXK65252.1
Glycosyl hydrolase family 3 protein; KEGG: rci:LRC258 7.4e-188 bglX; thermostable beta-glucosidase K05349; Belongs to the glycosyl hydrolase 3 family.
       0.437
KXK65757.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.96.
  
     0.431
KXK64488.1
Prepilin-type cleavage/methylation protein; KEGG: rba:RB7745 5.0e-07 prtB; serine protease homologue-secreted serine protease K01417; Psort location: OuterMembrane, score: 9.49.
  
     0.410
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.