STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK65286.1DNA binding domain, excisionase family; Psort location: Cytoplasmic, score: 8.96. (75 aa)    
Predicted Functional Partners:
KXK65288.1
Site-specific recombinase, phage integrase family; KEGG: bqy:MUS_1239 1.2e-21 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein); Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
 
     0.938
KXK65287.1
DNA binding domain, excisionase family.
 
    
0.804
KXK65284.1
Toxin-antitoxin system, toxin component, MazF domain protein; KEGG: clb:Clo1100_3693 7.3e-23 growth inhibitor; K07171 mRNA interferase; Psort location: Cytoplasmic, score: 8.96.
 
     0.639
KXK66020.1
Hypothetical protein; KEGG: tcr:508881.70 0.00017 DNA ligase K01971; Psort location: Cytoplasmic, score: 8.96.
  
     0.613
KXK66457.1
Site-specific recombinase, phage integrase family; KEGG: bsr:I33_1800 5.5e-09 xerC; ATP-dependent protease HslV K03733; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
 
     0.599
KXK65285.1
DNA binding domain, excisionase family.
 
    
0.555
KXK66451.1
KEGG: efc:EFAU004_02773 7.2e-48 DNA-directed RNA polymerase specialized sigma subunit.
  
     0.484
KXK66902.1
Sigma-70, region 4; KEGG: efc:EFAU004_02773 2.4e-15 DNA-directed RNA polymerase specialized sigma subunit.
  
     0.417
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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