STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurrence
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[Homology]
Score
rbsA-4Putative sugar ABC transporter, ATP binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (487 aa)    
Predicted Functional Partners:
KXK65298.1
Sugar-binding domain protein; KEGG: tex:Teth514_0166 9.7e-44 monosaccharide-transporting ATPase K10439; Psort location: Periplasmic, score: 9.76.
  
 0.957
RbsC-11
Putative ribose ABC transporter permease protein; KEGG: amt:Amet_0588 1.3e-94 monosaccharide-transporting ATPase K10820; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 0.888
KXK64135.1
Hypothetical protein; KEGG: bbv:HMPREF9228_1456 3.5e-23 rbsB; D-ribose-binding periplasmic protein K10439; Psort location: Periplasmic, score: 10.00.
  
 0.848
KXK65297.1
Ribose ABC transporter permease protein; KEGG: nth:Nther_2686 1.7e-76 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
   0.775
RbsC-5
Putative ribose ABC transporter permease protein; KEGG: trq:TRQ2_0974 8.7e-75 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.487
RbsC-6
Putative ribose ABC transporter permease protein; KEGG: apr:Apre_1619 2.0e-68 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.484
RbsC-3
Ribose ABC transporter permease protein; KEGG: ach:Achl_4607 3.3e-75 Monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.473
RbsC-4
KEGG: ctu:CTU_42040 4.2e-59 rbsC; ribose ABC transporter permease K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.468
RbsC-9
Putative ribose transport system permease protein RbsC; KEGG: apr:Apre_1619 3.3e-66 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.468
RbsC
KEGG: ypi:YpsIP31758_1509 7.4e-62 rbsC2; ribose ABC transporter permease K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.463
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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